Be sure to thoroughly wash your new cylinder and re-oil everything before assembly. I like to use plenty of yamalube R in my cylinder and piston, rings, powervalves, ect when assembling a top end. I like to use premix because it will burn off and not stick around and gum up like some assembly lubes.
everybody will have there preference on what they use. just be sure not to overlook that so you have a happy cylinder and top end